dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000093_4|CGC4
Gene ID: MGYG000000093_02619
Location and strand information: 234735 - 235964 (-)
Family: 2.A.42.2.5
Protein type: TC
Protein description: Inner membrane transport protein YqeG

Gene clsuter ID: MGYG000000093_4|CGC4
Gene ID: MGYG000000093_02620
Location and strand information: 236075 - 236563 (-)
Family: 2.A.117.1.3
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000093_4|CGC4
Gene ID: MGYG000000093_02621
Location and strand information: 236660 - 237532 (+)
Family: HTH_1
Protein type: TF
Protein description: HTH-type transcriptional regulator ArgP

Gene clsuter ID: MGYG000000093_4|CGC4
Gene ID: MGYG000000093_02622
Location and strand information: 237663 - 238838 (+)
Family: null
Protein type: null
Protein description: Acetyl-CoA acetyltransferase

Gene clsuter ID: MGYG000000093_4|CGC4
Gene ID: MGYG000000093_02623
Location and strand information: 239083 - 239778 (+)
Family: 1.B.35.1.7
Protein type: TC
Protein description: Oligogalacturonate-specific porin KdgM

Gene clsuter ID: MGYG000000093_4|CGC4
Gene ID: MGYG000000093_02624
Location and strand information: 240010 - 241185 (-)
Family: PL22_1|PL22
Protein type: CAZyme
Protein description: Oligogalacturonate lyase
Protein isoelectric point: 5.2555
Protein molecular weight: 44173.4
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000093_4|CGC4
Gene ID: MGYG000000093_02625
Location and strand information: 241728 - 242489 (+)
Family: null
Protein type: null
Protein description: 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase

Gene clsuter ID: MGYG000000093_4|CGC4
Gene ID: MGYG000000093_02626
Location and strand information: 242801 - 244219 (+)
Family: 2.A.1.1.2
Protein type: TC
Protein description: Arabinose-proton symporter

Gene clsuter ID: MGYG000000093_4|CGC4
Gene ID: MGYG000000093_02627
Location and strand information: 244220 - 245215 (-)
Family: LacI
Protein type: TF
Protein description: HTH-type transcriptional repressor CytR

Gene clsuter ID: MGYG000000093_4|CGC4
Gene ID: MGYG000000093_02628
Location and strand information: 245456 - 246697 (+)
Family: 2.A.1.5.2
Protein type: TC
Protein description: Sucrose permease

Gene clsuter ID: MGYG000000093_4|CGC4
Gene ID: MGYG000000093_02629
Location and strand information: 246716 - 248149 (+)
Family: GH32
Protein type: CAZyme
Protein description: Sucrose-6-phosphate hydrolase
Protein isoelectric point: 5.0467
Protein molecular weight: 54448.96
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000093_4|CGC4
Gene ID: MGYG000000093_02630
Location and strand information: 248262 - 249605 (+)
Family: 1.B.15.1.1
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000000093_4|CGC4
Gene ID: MGYG000000093_02631
Location and strand information: 249929 - 251056 (-)
Family: PL22_1|PL22
Protein type: CAZyme
Protein description: Oligogalacturonate lyase
Protein isoelectric point: 5.9175
Protein molecular weight: 43047.22
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000093_4|CGC4
Gene ID: MGYG000000093_02632
Location and strand information: 251128 - 252414 (-)
Family: 3.A.1.1.11
Protein type: TC
Protein description: Putative ABC transporter substrate-binding protein YesO

Gene clsuter ID: MGYG000000093_4|CGC4
Gene ID: MGYG000000093_02633
Location and strand information: 252431 - 253558 (-)
Family: 3.A.1.1.11
Protein type: TC
Protein description: Trehalose import ATP-binding protein SugC

Gene clsuter ID: MGYG000000093_4|CGC4
Gene ID: MGYG000000093_02634
Location and strand information: 253571 - 254473 (-)
Family: 3.A.1.1.11
Protein type: TC
Protein description: L-arabinose transport system permease protein AraQ

Gene clsuter ID: MGYG000000093_4|CGC4
Gene ID: MGYG000000093_02635
Location and strand information: 254466 - 255356 (-)
Family: 3.A.1.1.11
Protein type: TC
Protein description: Lactose transport system permease protein LacF

Protein ID	eCAMI subfam	CAZyme substrate
MGYG000000093_02624	PL22_e0\|4.2.2.6	pectin
MGYG000000093_02629	GH32_e63\|3.2.1.26	fructan
MGYG000000093_02631	PL22_e0\|4.2.2.6	pectin

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CGC gene composition diagram

Gene composition table

Substrate predicted by eCAMI subfamilies is pectin

Substrate predicted by dbCAN-PUL is pectin download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000093_02619	Inner membrane transport protein YqeG	TC	234735	235964	-	2.A.42.2.5
MGYG000000093_02620	hypothetical protein	TC	236075	236563	-	2.A.117.1.3
MGYG000000093_02621	HTH-type transcriptional regulator ArgP	TF	236660	237532	+	HTH_1
MGYG000000093_02622	Acetyl-CoA acetyltransferase	null	237663	238838	+	Thiolase_N\| Thiolase_C
MGYG000000093_02623	Oligogalacturonate-specific porin KdgM	TC	239083	239778	+	1.B.35.1.7
MGYG000000093_02624	Oligogalacturonate lyase	CAZyme	240010	241185	-	PL22_1\| PL22
MGYG000000093_02625	2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase	null	241728	242489	+	adh_short_C2
MGYG000000093_02626	Arabinose-proton symporter	TC	242801	244219	+	2.A.1.1.2
MGYG000000093_02627	HTH-type transcriptional repressor CytR	TF	244220	245215	-	LacI
MGYG000000093_02628	Sucrose permease	TC	245456	246697	+	2.A.1.5.2
MGYG000000093_02629	Sucrose-6-phosphate hydrolase	CAZyme	246716	248149	+	GH32
MGYG000000093_02630	hypothetical protein	TC	248262	249605	+	1.B.15.1.1
MGYG000000093_02631	Oligogalacturonate lyase	CAZyme	249929	251056	-	PL22_1\| PL22
MGYG000000093_02632	Putative ABC transporter substrate-binding protein YesO	TC	251128	252414	-	3.A.1.1.11
MGYG000000093_02633	Trehalose import ATP-binding protein SugC	TC	252431	253558	-	3.A.1.1.11
MGYG000000093_02634	L-arabinose transport system permease protein AraQ	TC	253571	254473	-	3.A.1.1.11
MGYG000000093_02635	Lactose transport system permease protein LacF	TC	254466	255356	-	3.A.1.1.11
Protein ID	Protein Name	Type	Start	End	Strand	Signature